Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm24460-201ENSMUST00000082731 106 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 n-R5s161-201ENSMUST00000083728 114 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm23503-201ENSMUST00000083903 107 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm23691-201ENSMUST00000101878 107 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm23440-201ENSMUST00000104299 130 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm26144-201ENSMUST00000104475 132 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm13890-201ENSMUST00000117578 390 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm15480-201ENSMUST00000120442 519 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm14919-201ENSMUST00000120839 390 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm12890-201ENSMUST00000120885 373 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm12267-201ENSMUST00000121609 761 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm22819-201ENSMUST00000157445 303 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm24692-201ENSMUST00000157761 146 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm25861-201ENSMUST00000158251 109 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm23050-201ENSMUST00000158775 165 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm24179-201ENSMUST00000158925 127 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm16164-201ENSMUST00000160078 468 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm20794-201ENSMUST00000177626 628 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm26057-201ENSMUST00000178099 165 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Mir6911-201ENSMUST00000184241 69 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm28146-201ENSMUST00000185517 701 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm28574-201ENSMUST00000185757 699 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm28397-201ENSMUST00000187970 699 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm29366-201ENSMUST00000190481 699 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm28188-201ENSMUST00000190483 236 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm38046-201ENSMUST00000192733 550 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm22897-201ENSMUST00000197860 128 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm44312-201ENSMUST00000203536 469 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm44162-201ENSMUST00000203543 544 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm4083-201ENSMUST00000207158 451 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm19880-201ENSMUST00000207731 318 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm18903-201ENSMUST00000215343 480 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm35558-203ENSMUST00000222264 204 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.97□□□□□ -1.61
Pcdh1F7BJK1 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.96□□□□□ -1.61
Pcdh1F7BJK1 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
Pcdh1F7BJK1 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Pcdh1F7BJK1 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Pcdh1F7BJK1 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm5381-201ENSMUST00000117975 1250 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm15531-201ENSMUST00000118062 252 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm14292-201ENSMUST00000118761 456 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm14472-201ENSMUST00000119815 282 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm13578-201ENSMUST00000120849 590 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm26350-201ENSMUST00000157531 288 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm23386-201ENSMUST00000158585 144 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm24550-201ENSMUST00000158648 279 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm3216-201ENSMUST00000166927 486 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm17421-201ENSMUST00000167845 674 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm23806-201ENSMUST00000175157 109 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms