Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Mir676-201ENSMUST00000102443 89 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm23532-201ENSMUST00000104569 112 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm11566-201ENSMUST00000118550 203 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm11262-201ENSMUST00000119326 833 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm12577-201ENSMUST00000119701 574 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm24008-201ENSMUST00000157733 138 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Gm8757-201ENSMUST00000119660 372 ntBASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Gm25860-201ENSMUST00000158252 126 ntBASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.02□□□□□ -1.77
Col4a6B1AVK5 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Gm7439-201ENSMUST00000214053 835 ntBASIC4.02□□□□□ -1.77
Col4a6B1AVK5 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.02□□□□□ -1.77
Col4a6B1AVK5 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col4a6B1AVK5 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm14050-201ENSMUST00000117052 346 ntBASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm15994-201ENSMUST00000118029 402 ntBASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm16260-201ENSMUST00000155141 304 ntBASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm9775-201ENSMUST00000189402 331 ntBASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm17966-201ENSMUST00000193453 594 ntBASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm42458-201ENSMUST00000201914 369 ntBASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm9712-201ENSMUST00000210842 311 ntBASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm4987-201ENSMUST00000078326 408 ntBASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col4a6B1AVK5 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm13677-201ENSMUST00000120739 595 ntBASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm16566-201ENSMUST00000160387 910 ntBASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm18505-201ENSMUST00000187360 790 ntBASIC4□□□□□ -1.77
Col4a6B1AVK5 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm18194-201ENSMUST00000210455 481 ntBASIC4□□□□□ -1.77
Col4a6B1AVK5 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm45860-201ENSMUST00000212700 334 ntBASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4□□□□□ -1.77
Col4a6B1AVK5 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Col4a6B1AVK5 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col4a6B1AVK5 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Col4a6B1AVK5 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Col4a6B1AVK5 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col4a6B1AVK5 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4□□□□□ -1.77
Col4a6B1AVK5 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm37747-201ENSMUST00000193717 4003 ntBASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm44527-202ENSMUST00000204519 1314 ntBASIC4□□□□□ -1.77
Col4a6B1AVK5 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col4a6B1AVK5 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col4a6B1AVK5 Gm38101-201ENSMUST00000193484 3557 ntBASIC4□□□□□ -1.77
Col4a6B1AVK5 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col4a6B1AVK5 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms