Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm25019-201ENSMUST00000179732 110 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Mir6715-201ENSMUST00000184990 57 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm27427-201ENSMUST00000185134 193 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm28060-201ENSMUST00000191554 189 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm37167-201ENSMUST00000194946 396 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm34224-201ENSMUST00000204606 364 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm20586-201ENSMUST00000210122 547 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.79□□□□□ -1.8
CtcflA2APF3 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.79□□□□□ -1.8
CtcflA2APF3 AC132384.6-201ENSMUST00000218976 1206 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.79□□□□□ -1.8
CtcflA2APF3 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm18441-201ENSMUST00000223539 617 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CtcflA2APF3 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm22971-201ENSMUST00000083305 97 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm24031-201ENSMUST00000083930 131 ntBASIC3.79□□□□□ -1.8
CtcflA2APF3 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CtcflA2APF3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CtcflA2APF3 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CtcflA2APF3 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.79□□□□□ -1.8
CtcflA2APF3 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm13607-201ENSMUST00000117875 539 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm12719-201ENSMUST00000118859 241 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.78□□□□□ -1.8
CtcflA2APF3 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm24113-201ENSMUST00000157477 276 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm24689-201ENSMUST00000157760 104 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm3053-201ENSMUST00000161709 616 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm5974-201ENSMUST00000181607 986 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm20574-201ENSMUST00000182867 917 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm28155-201ENSMUST00000191066 151 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm29138-201ENSMUST00000191444 348 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm28872-201ENSMUST00000191518 158 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm44138-201ENSMUST00000204939 271 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm43922-201ENSMUST00000205071 328 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm20074-201ENSMUST00000208144 484 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm45651-201ENSMUST00000210857 335 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.78□□□□□ -1.8
CtcflA2APF3 AC172027.1-201ENSMUST00000217659 337 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Apoo-ps-201ENSMUST00000061241 586 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
CtcflA2APF3 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Snora31-201ENSMUST00000083213 130 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm10212-201ENSMUST00000087884 324 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm10242-201ENSMUST00000090064 330 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.78□□□□□ -1.8
CtcflA2APF3 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CtcflA2APF3 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CtcflA2APF3 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.78□□□□□ -1.81
CtcflA2APF3 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.77□□□□□ -1.81
CtcflA2APF3 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CtcflA2APF3 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC3.77□□□□□ -1.81
CtcflA2APF3 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.77□□□□□ -1.81
CtcflA2APF3 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CtcflA2APF3 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CtcflA2APF3 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CtcflA2APF3 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.77□□□□□ -1.81
CtcflA2APF3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms