Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdhb3Q91XZ7 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdhb3Q91XZ7 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdhb3Q91XZ7 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdhb3Q91XZ7 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdhb3Q91XZ7 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdhb3Q91XZ7 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.4□□□□□ -1.39
Pcdhb3Q91XZ7 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdhb3Q91XZ7 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm24519-201ENSMUST00000104507 132 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm13311-201ENSMUST00000117863 379 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm14175-201ENSMUST00000119835 241 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm13642-201ENSMUST00000121697 381 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm14353-201ENSMUST00000122200 869 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm25722-201ENSMUST00000157498 279 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm25384-201ENSMUST00000157807 105 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm23262-201ENSMUST00000158323 168 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm4222-201ENSMUST00000165784 470 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm9317-201ENSMUST00000197055 862 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm44348-201ENSMUST00000200165 122 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm9357-201ENSMUST00000207138 805 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm45156-201ENSMUST00000207255 439 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm18602-201ENSMUST00000209794 851 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 CT009718.4-201ENSMUST00000221881 109 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm2645-201ENSMUST00000223516 547 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Mir296-201ENSMUST00000083587 79 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm45697-201ENSMUST00000212893 2876 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Gm44789-201ENSMUST00000207195 3101 ntBASIC6.39□□□□□ -1.39
Pcdhb3Q91XZ7 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm15310-201ENSMUST00000117891 372 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm4853-201ENSMUST00000119359 394 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm11472-201ENSMUST00000121305 556 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm24286-201ENSMUST00000157632 128 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm24682-201ENSMUST00000158764 137 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm24100-201ENSMUST00000178592 79 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm24137-201ENSMUST00000180055 79 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm22391-201ENSMUST00000180356 79 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm29397-201ENSMUST00000185205 333 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm29665-201ENSMUST00000191457 528 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm3678-201ENSMUST00000218888 492 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 AC165157.3-201ENSMUST00000220815 103 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms