Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Crs-ps-201ENSMUST00000203723 760 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm18924-201ENSMUST00000211929 316 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm6068-201ENSMUST00000222270 387 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 AC154788.1-201ENSMUST00000225003 340 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Snora44-201ENSMUST00000082670 129 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Mir375-201ENSMUST00000083682 64 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 AC154184.1-201ENSMUST00000224375 1620 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm15102-201ENSMUST00000118740 1502 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm25088-201ENSMUST00000101803 79 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm3943-201ENSMUST00000118606 718 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm23280-201ENSMUST00000157905 139 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm23277-201ENSMUST00000157914 136 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm27024-201ENSMUST00000182561 755 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm28506-201ENSMUST00000189937 150 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm18482-201ENSMUST00000202405 760 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm44083-201ENSMUST00000203114 337 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm8523-201ENSMUST00000211386 552 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm45750-201ENSMUST00000211966 354 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm18587-201ENSMUST00000213736 841 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm46997-201ENSMUST00000222108 217 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 AC154576.2-202ENSMUST00000223916 688 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 AV026068-237ENSMUST00000226075 572 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 AC151833.1-201ENSMUST00000227752 574 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm6043-201ENSMUST00000099961 492 ntBASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Trim47Q8C0E3 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm24886-201ENSMUST00000104384 123 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms