Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm25163-201ENSMUST00000158905 104 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm7335-201ENSMUST00000172475 373 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm25397-201ENSMUST00000176951 92 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm8221-201ENSMUST00000178052 564 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm28353-201ENSMUST00000186482 570 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm28533-201ENSMUST00000186741 570 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm38075-201ENSMUST00000191979 920 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm43856-201ENSMUST00000197004 369 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm18644-201ENSMUST00000211458 815 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm18904-201ENSMUST00000218756 329 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 AC154390.1-201ENSMUST00000225629 277 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Trim56Q80VI1 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Trim56Q80VI1 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim56Q80VI1 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim56Q80VI1 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim56Q80VI1 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Trim56Q80VI1 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm11898-201ENSMUST00000117161 385 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm11912-201ENSMUST00000117235 264 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm8430-201ENSMUST00000119780 471 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm14175-201ENSMUST00000119835 241 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm16362-201ENSMUST00000135189 214 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm5699-201ENSMUST00000152491 723 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm6632-201ENSMUST00000168425 954 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm20543-201ENSMUST00000174200 726 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm27528-201ENSMUST00000183544 205 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm28700-201ENSMUST00000187614 579 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm43142-201ENSMUST00000198670 361 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm18325-201ENSMUST00000203228 835 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm45427-201ENSMUST00000209572 1253 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm45722-201ENSMUST00000213075 466 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm7984-201ENSMUST00000060640 538 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm26064-201ENSMUST00000083381 109 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 n-R5s13-201ENSMUST00000093707 119 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Gm42536-201ENSMUST00000197562 1613 ntBASIC6.21□□□□□ -1.42
Trim56Q80VI1 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Trim56Q80VI1 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim56Q80VI1 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim56Q80VI1 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim56Q80VI1 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim56Q80VI1 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim56Q80VI1 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim56Q80VI1 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim56Q80VI1 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim56Q80VI1 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim56Q80VI1 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim56Q80VI1 AC164297.6-201ENSMUST00000224643 1568 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms