Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Mir5125-201ENSMUST00000175240 79 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm22911-201ENSMUST00000177920 107 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm9457-201ENSMUST00000180176 372 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm37455-201ENSMUST00000191993 529 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm20162-201ENSMUST00000193629 871 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm45185-201ENSMUST00000207556 404 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm44655-201ENSMUST00000207768 423 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm32526-201ENSMUST00000221878 981 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm5830-201ENSMUST00000049117 443 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Mir143-201ENSMUST00000083511 63 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm24764-201ENSMUST00000083686 199 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm3867-201ENSMUST00000086108 279 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Sh3rf1Q69ZI1 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sh3rf1Q69ZI1 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.71□□□□□ -1.49
Sh3rf1Q69ZI1 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sh3rf1Q69ZI1 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.71□□□□□ -1.49
Sh3rf1Q69ZI1 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Sh3rf1Q69ZI1 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Mir449c-201ENSMUST00000102192 109 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm11970-201ENSMUST00000116105 320 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm12646-201ENSMUST00000119144 238 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm8545-201ENSMUST00000120692 801 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm12340-201ENSMUST00000121617 462 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm13363-201ENSMUST00000122008 522 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm23250-201ENSMUST00000157444 267 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm21726-201ENSMUST00000179654 392 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm21978-201ENSMUST00000179696 377 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Zfp-ps-201ENSMUST00000185025 478 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28061-201ENSMUST00000189085 807 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm37492-201ENSMUST00000191948 376 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm37658-201ENSMUST00000192672 315 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm18553-201ENSMUST00000194152 634 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm9480-201ENSMUST00000198038 616 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm19060-201ENSMUST00000201959 421 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm44134-202ENSMUST00000204777 545 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm19900-201ENSMUST00000207285 576 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm24037-201ENSMUST00000082871 180 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Sh3rf1Q69ZI1 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms