Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Trbv11-201ENSMUST00000194354 260 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Gm43604-201ENSMUST00000199799 705 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Gm43424-201ENSMUST00000200484 253 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Gm8820-201ENSMUST00000204077 571 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.28□□□□□ -1.73
Upf3bQ3ULL6 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm13268-201ENSMUST00000117485 433 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm15313-201ENSMUST00000119179 282 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm29610-201ENSMUST00000187749 453 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm38061-201ENSMUST00000192490 365 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Upf3bQ3ULL6 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm9308-201ENSMUST00000119073 448 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm11719-201ENSMUST00000119399 351 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm24380-201ENSMUST00000122696 324 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm24503-201ENSMUST00000158454 135 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm16318-201ENSMUST00000162402 601 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Mir3620-201ENSMUST00000184710 61 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm38201-201ENSMUST00000192143 387 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm44371-201ENSMUST00000204148 467 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm19761-201ENSMUST00000205372 391 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm44681-201ENSMUST00000208447 842 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm5548-201ENSMUST00000055878 397 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upf3bQ3ULL6 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm22269-201ENSMUST00000104002 130 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm11510-201ENSMUST00000120278 347 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm5963-201ENSMUST00000143451 236 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm24850-201ENSMUST00000158029 119 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm26352-201ENSMUST00000158223 125 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm21070-201ENSMUST00000182425 985 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm19427-201ENSMUST00000183619 208 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Gm3213-201ENSMUST00000219296 441 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Upf3bQ3ULL6 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms