Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mir599-201ENSMUST00000102378 88 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm13555-201ENSMUST00000121668 319 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm25109-201ENSMUST00000122474 114 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm5699-201ENSMUST00000152491 723 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm24295-201ENSMUST00000158298 131 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hmgb1P63158 Mir3112-201ENSMUST00000175431 82 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm8241-201ENSMUST00000189286 816 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm9134-201ENSMUST00000193186 551 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm29813-201ENSMUST00000195856 447 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hmgb1P63158 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Mir6906-201ENSMUST00000198998 58 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm43215-201ENSMUST00000199108 252 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm43407-201ENSMUST00000199816 317 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm43580-201ENSMUST00000202892 284 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hmgb1P63158 AC134254.5-201ENSMUST00000223436 400 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hmgb1P63158 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.6□□□□□ -1.51
Hmgb1P63158 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hmgb1P63158 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb1P63158 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb1P63158 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm7429-201ENSMUST00000118664 348 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm12768-201ENSMUST00000120055 759 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm23539-201ENSMUST00000157537 224 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm24666-201ENSMUST00000158937 167 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm6155-201ENSMUST00000173735 341 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm27409-201ENSMUST00000184727 80 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm29563-201ENSMUST00000187249 496 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm33952-201ENSMUST00000197795 408 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm38670-201ENSMUST00000199248 77 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm17893-201ENSMUST00000203017 770 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm45422-201ENSMUST00000211476 246 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm5175-202ENSMUST00000219699 529 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hmgb1P63158 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm23939-201ENSMUST00000082880 133 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Gm25818-201ENSMUST00000083282 164 ntBASIC5.59□□□□□ -1.51
Hmgb1P63158 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hmgb1P63158 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
Hmgb1P63158 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Hmgb1P63158 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Hmgb1P63158 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.59□□□□□ -1.52
Hmgb1P63158 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.59□□□□□ -1.52
Hmgb1P63158 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb1P63158 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb1P63158 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm23063-201ENSMUST00000102350 93 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm24429-201ENSMUST00000104076 132 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm14880-201ENSMUST00000117581 292 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm15176-201ENSMUST00000117734 135 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm12039-201ENSMUST00000118219 180 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm8129-201ENSMUST00000118230 213 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm13603-201ENSMUST00000119404 83 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm13419-201ENSMUST00000121711 271 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm12358-201ENSMUST00000121842 520 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Snrpert-201ENSMUST00000121967 279 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm24383-201ENSMUST00000122691 333 ntBASIC5.58□□□□□ -1.52
Hmgb1P63158 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.58□□□□□ -1.52
Hmgb1P63158 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms