Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm7721-201ENSMUST00000200446 546 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm44277-201ENSMUST00000205128 649 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm19032-201ENSMUST00000208584 592 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm19599-201ENSMUST00000218898 358 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm5045-201ENSMUST00000027054 810 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm5215-201ENSMUST00000054380 405 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm23623-201ENSMUST00000082461 107 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm23330-201ENSMUST00000082660 164 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm24525-201ENSMUST00000082917 151 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm23456-201ENSMUST00000083335 137 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.33□□□□□ -1.72
Shisa8J3QNX5 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Shisa8J3QNX5 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm22019-201ENSMUST00000104359 96 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm15108-201ENSMUST00000116160 803 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm16400-201ENSMUST00000116523 1029 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Mir669d-2-201ENSMUST00000116854 86 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm14751-201ENSMUST00000117693 222 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm14655-201ENSMUST00000120124 578 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm13867-201ENSMUST00000120844 395 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm2855-201ENSMUST00000166765 456 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm9587-201ENSMUST00000172449 454 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm27036-201ENSMUST00000182465 980 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm28957-201ENSMUST00000190174 373 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm17953-201ENSMUST00000192061 667 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm37771-201ENSMUST00000193121 265 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm43384-201ENSMUST00000200569 637 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 AC164164.2-201ENSMUST00000221809 785 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm6776-201ENSMUST00000057752 900 ntBASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Shisa8J3QNX5 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Gm15001-201ENSMUST00000117657 795 ntBASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Gm14107-201ENSMUST00000117774 330 ntBASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Gm14871-201ENSMUST00000119056 194 ntBASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Gm12006-201ENSMUST00000120786 403 ntBASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Gm14125-202ENSMUST00000120921 756 ntBASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Gm12103-201ENSMUST00000121892 362 ntBASIC4.31□□□□□ -1.72
Shisa8J3QNX5 Gm15111-201ENSMUST00000122142 878 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms