Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Gm25270-201ENSMUST00000122606 138 ntBASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Gm26342-201ENSMUST00000104557 129 ntBASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Gm25866-201ENSMUST00000158245 112 ntBASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Gm29105-201ENSMUST00000187256 450 ntBASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Gm25377-201ENSMUST00000104334 129 ntBASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.78□□□□□ -1.8
Col6a3E9PWQ3 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Col6a3E9PWQ3 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 AC122408.2-201ENSMUST00000217901 1391 ntBASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Gm13785-201ENSMUST00000119099 690 ntBASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Gm12704-201ENSMUST00000119789 464 ntBASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Gm23048-201ENSMUST00000157237 129 ntBASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Gm26100-201ENSMUST00000157245 127 ntBASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col6a3E9PWQ3 Gm27903-201ENSMUST00000175482 126 ntBASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Gm17838-201ENSMUST00000205872 876 ntBASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 AC122357.1-201ENSMUST00000221652 1515 ntBASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Gm12577-201ENSMUST00000119701 574 ntBASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Gm11398-201ENSMUST00000120330 320 ntBASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col6a3E9PWQ3 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms