Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5538W4VSP6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5538W4VSP6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5538W4VSP6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Gm5538W4VSP6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5538W4VSP6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5538W4VSP6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.81■□□□□ 0.44
Gm5538W4VSP6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5538W4VSP6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Gm22240-201ENSMUST00000175225 82 ntBASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5538W4VSP6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Mir1199-201ENSMUST00000117015 119 ntBASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Gm4974-201ENSMUST00000209974 875 ntBASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5538W4VSP6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5538W4VSP6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Gm5538W4VSP6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5538W4VSP6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5538W4VSP6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.77■□□□□ 0.44
Gm5538W4VSP6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5538W4VSP6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5538W4VSP6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.77■□□□□ 0.44
Gm5538W4VSP6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5538W4VSP6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5538W4VSP6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.77■□□□□ 0.43
Gm5538W4VSP6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Gm5538W4VSP6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm5538W4VSP6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Gm5538W4VSP6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Gm5538W4VSP6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms