Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Gm44549-201ENSMUST00000208351 577 ntBASIC15.72■□□□□ 0.11
H2afb3S4R1G7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb3S4R1G7 Flg-201ENSMUST00000050758 1488 ntBASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb3S4R1G7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
H2afb3S4R1G7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
H2afb3S4R1G7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Gm10418-201ENSMUST00000100943 576 ntBASIC15.7■□□□□ 0.1
H2afb3S4R1G7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Mir5133-201ENSMUST00000174955 77 ntBASIC15.7■□□□□ 0.1
H2afb3S4R1G7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Zfp783-201ENSMUST00000095946 670 ntBASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb3S4R1G7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb3S4R1G7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms