Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crlf3Q9Z2L7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crlf3Q9Z2L7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crlf3Q9Z2L7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crlf3Q9Z2L7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crlf3Q9Z2L7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf3Q9Z2L7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf3Q9Z2L7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf3Q9Z2L7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.65■□□□□ 0.42
Crlf3Q9Z2L7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Crlf3Q9Z2L7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Crlf3Q9Z2L7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
Crlf3Q9Z2L7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf3Q9Z2L7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf3Q9Z2L7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.64■□□□□ 0.41
Crlf3Q9Z2L7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf3Q9Z2L7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf3Q9Z2L7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf3Q9Z2L7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf3Q9Z2L7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf3Q9Z2L7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf3Q9Z2L7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf3Q9Z2L7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms