Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h3Q9Z0Y9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 AA414768-201ENSMUST00000121924 1257 ntBASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nr1h3Q9Z0Y9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm18101-201ENSMUST00000215769 548 ntBASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr1h3Q9Z0Y9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr1h3Q9Z0Y9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm22697-201ENSMUST00000175194 63 ntBASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr1h3Q9Z0Y9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm10819-201ENSMUST00000099988 561 ntBASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms