Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn9Q9Z0S7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.83■□□□□ 0.28
Cldn9Q9Z0S7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn9Q9Z0S7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn9Q9Z0S7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn9Q9Z0S7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cldn9Q9Z0S7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn9Q9Z0S7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.82■□□□□ 0.28
Cldn9Q9Z0S7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn9Q9Z0S7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn9Q9Z0S7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn9Q9Z0S7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn9Q9Z0S7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.81■□□□□ 0.28
Cldn9Q9Z0S7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cldn9Q9Z0S7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn9Q9Z0S7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Gm6576-201ENSMUST00000169678 883 ntBASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn9Q9Z0S7 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.77■□□□□ 0.28
Cldn9Q9Z0S7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cldn9Q9Z0S7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn9Q9Z0S7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn9Q9Z0S7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.77■□□□□ 0.28
Cldn9Q9Z0S7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn9Q9Z0S7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn9Q9Z0S7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms