Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn3Q9Z0G9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn3Q9Z0G9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn3Q9Z0G9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Cldn3Q9Z0G9 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.64■□□□□ 0.42
Cldn3Q9Z0G9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
Cldn3Q9Z0G9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cldn3Q9Z0G9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cldn3Q9Z0G9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cldn3Q9Z0G9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn3Q9Z0G9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn3Q9Z0G9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn3Q9Z0G9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn3Q9Z0G9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn3Q9Z0G9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.63■□□□□ 0.41
Cldn3Q9Z0G9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn3Q9Z0G9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn3Q9Z0G9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn3Q9Z0G9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms