Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Gm10653-202ENSMUST00000139570 835 ntBASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ClcnkaQ9WUB7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Gm15375-201ENSMUST00000119510 849 ntBASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Mir6349-201ENSMUST00000184059 97 ntBASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ClcnkaQ9WUB7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Gm18666-201ENSMUST00000190039 958 ntBASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ClcnkaQ9WUB7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ClcnkaQ9WUB7 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Idnk-204ENSMUST00000226010 1898 ntBASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms