Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom3Q9QXN0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom3Q9QXN0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom3Q9QXN0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom3Q9QXN0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Gm7889-201ENSMUST00000185591 958 ntBASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Gm30025-201ENSMUST00000218555 728 ntBASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom3Q9QXN0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shroom3Q9QXN0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shroom3Q9QXN0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Shroom3Q9QXN0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.52■□□□□ 0.39
Shroom3Q9QXN0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shroom3Q9QXN0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Gm43183-201ENSMUST00000200632 547 ntBASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom3Q9QXN0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom3Q9QXN0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Gm11539-201ENSMUST00000119837 557 ntBASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Gm13436-201ENSMUST00000120418 567 ntBASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom3Q9QXN0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Gm6659-201ENSMUST00000174752 547 ntBASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms