Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a2Q9JLR1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
Sec61a2Q9JLR1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Gm38285-201ENSMUST00000192928 922 ntBASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Gm2559-201ENSMUST00000201323 363 ntBASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.72■□□□□ 0.11
Sec61a2Q9JLR1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Trmt13-210ENSMUST00000198454 880 ntBASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Zfp783-201ENSMUST00000095946 670 ntBASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a2Q9JLR1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sec61a2Q9JLR1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Sec61a2Q9JLR1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sec61a2Q9JLR1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.71■□□□□ 0.1
Sec61a2Q9JLR1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms