Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Gm34391-201ENSMUST00000203706 907 ntBASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Gm44771-201ENSMUST00000206975 626 ntBASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn5aQ9JJV9 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Scn5aQ9JJV9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Scn5aQ9JJV9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Mir8112-201ENSMUST00000184382 131 ntBASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Scn5aQ9JJV9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms