Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Gm27405-201ENSMUST00000184201 112 ntBASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Zfp783-201ENSMUST00000095946 670 ntBASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Herpud1Q9JJK5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herpud1Q9JJK5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Herpud1Q9JJK5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Herpud1Q9JJK5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Herpud1Q9JJK5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Herpud1Q9JJK5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Herpud1Q9JJK5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Herpud1Q9JJK5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Herpud1Q9JJK5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Herpud1Q9JJK5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Mir5133-201ENSMUST00000174955 77 ntBASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Rab3c-203ENSMUST00000224180 967 ntBASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Herpud1Q9JJK5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Herpud1Q9JJK5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Herpud1Q9JJK5 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.51□□□□□ -0.09
Herpud1Q9JJK5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Herpud1Q9JJK5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.51□□□□□ -0.09
Herpud1Q9JJK5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms