Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Cacna1fQ9JIS7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cacna1fQ9JIS7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cacna1fQ9JIS7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cacna1fQ9JIS7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Cacna1fQ9JIS7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacna1fQ9JIS7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacna1fQ9JIS7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.89■□□□□ 0.77
Cacna1fQ9JIS7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacna1fQ9JIS7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacna1fQ9JIS7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacna1fQ9JIS7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cacna1fQ9JIS7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1fQ9JIS7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Olfr129-201ENSMUST00000122318 993 ntBASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1fQ9JIS7 Gm18421-201ENSMUST00000204122 625 ntBASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Gm27000-201ENSMUST00000182943 842 ntBASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1fQ9JIS7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1fQ9JIS7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1fQ9JIS7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1fQ9JIS7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Cacna1fQ9JIS7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1fQ9JIS7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1fQ9JIS7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
Cacna1fQ9JIS7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1fQ9JIS7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Fst-202ENSMUST00000223640 2612 ntBASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Cacna1fQ9JIS7 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.83■□□□□ 0.77
Cacna1fQ9JIS7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1fQ9JIS7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1fQ9JIS7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1fQ9JIS7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1fQ9JIS7 Gm15794-201ENSMUST00000120182 631 ntBASIC19.83■□□□□ 0.77
Cacna1fQ9JIS7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1fQ9JIS7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.83■□□□□ 0.77
Cacna1fQ9JIS7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Cacna1fQ9JIS7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.83■□□□□ 0.77
Cacna1fQ9JIS7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms