Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup50Q9JIH2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup50Q9JIH2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nup50Q9JIH2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup50Q9JIH2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup50Q9JIH2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nup50Q9JIH2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup50Q9JIH2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.46■□□□□ 0.55
Nup50Q9JIH2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup50Q9JIH2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup50Q9JIH2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup50Q9JIH2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nup50Q9JIH2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup50Q9JIH2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup50Q9JIH2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup50Q9JIH2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nup50Q9JIH2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup50Q9JIH2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.46■□□□□ 0.54
Nup50Q9JIH2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nup50Q9JIH2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Gm12896-201ENSMUST00000118430 226 ntBASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.44■□□□□ 0.54
Nup50Q9JIH2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup50Q9JIH2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nup50Q9JIH2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Nup50Q9JIH2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nup50Q9JIH2 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.43■□□□□ 0.54
Nup50Q9JIH2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.43■□□□□ 0.54
Nup50Q9JIH2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nup50Q9JIH2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nup50Q9JIH2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nup50Q9JIH2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nup50Q9JIH2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.42■□□□□ 0.54
Nup50Q9JIH2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms