Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Copb1Q9JIF7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Copb1Q9JIF7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Copb1Q9JIF7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Copb1Q9JIF7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Copb1Q9JIF7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Copb1Q9JIF7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Copb1Q9JIF7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Gm13401-201ENSMUST00000117074 291 ntBASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Copb1Q9JIF7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Copb1Q9JIF7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Copb1Q9JIF7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Copb1Q9JIF7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Copb1Q9JIF7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Mtag2-201ENSMUST00000058665 714 ntBASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Copb1Q9JIF7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Copb1Q9JIF7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Mir5133-201ENSMUST00000174955 77 ntBASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Copb1Q9JIF7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.11■□□□□ 0.65
Copb1Q9JIF7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms