Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a3bpQ9EQG9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
Col4a3bpQ9EQG9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col4a3bpQ9EQG9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.02■□□□□ 0.79
Col4a3bpQ9EQG9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col4a3bpQ9EQG9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.02■□□□□ 0.79
Col4a3bpQ9EQG9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a3bpQ9EQG9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Gm43272-201ENSMUST00000200599 1584 ntBASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a3bpQ9EQG9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Gm5643-201ENSMUST00000117081 966 ntBASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a3bpQ9EQG9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Mtag2-201ENSMUST00000058665 714 ntBASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a3bpQ9EQG9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms