Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp8Q9DB85 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Il3ra-202ENSMUST00000223589 738 ntBASIC17.1■□□□□ 0.33
Rrp8Q9DB85 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp8Q9DB85 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Gm29518-201ENSMUST00000190858 372 ntBASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp8Q9DB85 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.08■□□□□ 0.33
Rrp8Q9DB85 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rrp8Q9DB85 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Gm11355-201ENSMUST00000121120 306 ntBASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rrp8Q9DB85 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 Gm17808-201ENSMUST00000200859 894 ntBASIC17.07■□□□□ 0.32
Rrp8Q9DB85 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rrp8Q9DB85 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Gm17807-201ENSMUST00000186869 298 ntBASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Gm17971-201ENSMUST00000190239 806 ntBASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms