Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4cQ9D7F7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.89■□□□□ 0.93
Chmp4cQ9D7F7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4cQ9D7F7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4cQ9D7F7 Gm5408-201ENSMUST00000197998 747 ntBASIC20.89■□□□□ 0.93
Chmp4cQ9D7F7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4cQ9D7F7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4cQ9D7F7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4cQ9D7F7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.89■□□□□ 0.93
Chmp4cQ9D7F7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4cQ9D7F7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4cQ9D7F7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4cQ9D7F7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4cQ9D7F7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4cQ9D7F7 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.88■□□□□ 0.93
Chmp4cQ9D7F7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Chmp4cQ9D7F7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.88■□□□□ 0.93
Chmp4cQ9D7F7 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.88■□□□□ 0.93
Chmp4cQ9D7F7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp4cQ9D7F7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Rab3c-203ENSMUST00000224180 967 ntBASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp4cQ9D7F7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp4cQ9D7F7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.85■□□□□ 0.93
Chmp4cQ9D7F7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Gm38285-201ENSMUST00000192928 922 ntBASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4cQ9D7F7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4cQ9D7F7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms