Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Upk3bl1Q9D701 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Upk3bl1Q9D701 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Upk3bl1Q9D701 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Gm43137-201ENSMUST00000198052 594 ntBASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Upk3bl1Q9D701 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Upk3bl1Q9D701 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Upk3bl1Q9D701 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms