Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.17■□□□□ 0.66
Cfap53Q9D439 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Gm11643-201ENSMUST00000119578 864 ntBASIC19.16■□□□□ 0.66
Cfap53Q9D439 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cfap53Q9D439 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.16■□□□□ 0.66
Cfap53Q9D439 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap53Q9D439 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cfap53Q9D439 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.15■□□□□ 0.66
Cfap53Q9D439 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.15■□□□□ 0.66
Cfap53Q9D439 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.14■□□□□ 0.66
Cfap53Q9D439 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cfap53Q9D439 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cfap53Q9D439 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.14■□□□□ 0.65
Cfap53Q9D439 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap53Q9D439 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.13■□□□□ 0.65
Cfap53Q9D439 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap53Q9D439 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.12■□□□□ 0.65
Cfap53Q9D439 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.12■□□□□ 0.65
Cfap53Q9D439 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap53Q9D439 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap53Q9D439 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap53Q9D439 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.11■□□□□ 0.65
Cfap53Q9D439 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap53Q9D439 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cfap53Q9D439 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms