Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.56■□□□□ 0.24
Upk1aQ9D132 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk1aQ9D132 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.55■□□□□ 0.24
Upk1aQ9D132 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Gm18671-201ENSMUST00000214826 683 ntBASIC16.55■□□□□ 0.24
Upk1aQ9D132 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk1aQ9D132 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Gm38285-201ENSMUST00000192928 922 ntBASIC16.54■□□□□ 0.24
Upk1aQ9D132 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Upk1aQ9D132 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.54■□□□□ 0.24
Upk1aQ9D132 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.54■□□□□ 0.24
Upk1aQ9D132 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.54■□□□□ 0.24
Upk1aQ9D132 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Upk1aQ9D132 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk1aQ9D132 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upk1aQ9D132 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.52■□□□□ 0.24
Upk1aQ9D132 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upk1aQ9D132 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Upk1aQ9D132 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upk1aQ9D132 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Upk1aQ9D132 AV356131-201ENSMUST00000206201 750 ntBASIC16.52■□□□□ 0.24
Upk1aQ9D132 Gm5874-201ENSMUST00000096101 508 ntBASIC16.52■□□□□ 0.24
Upk1aQ9D132 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Upk1aQ9D132 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk1aQ9D132 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms