Protein–RNA interactions for Protein: Q9CYC3

Tmem39a, Transmembrane protein 39A, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem39aQ9CYC3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem39aQ9CYC3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem39aQ9CYC3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tmem39aQ9CYC3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem39aQ9CYC3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem39aQ9CYC3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem39aQ9CYC3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Mir5130-201ENSMUST00000175160 84 ntBASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem39aQ9CYC3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tmem39aQ9CYC3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tmem39aQ9CYC3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.58■□□□□ 0.73
Tmem39aQ9CYC3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tmem39aQ9CYC3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tmem39aQ9CYC3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem39aQ9CYC3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.58■□□□□ 0.72
Tmem39aQ9CYC3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem39aQ9CYC3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem39aQ9CYC3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Tmem39aQ9CYC3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem39aQ9CYC3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem39aQ9CYC3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Gm12085-201ENSMUST00000119263 940 ntBASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Ank2-226ENSMUST00000189368 339 ntBASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem39aQ9CYC3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tmem39aQ9CYC3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tmem39aQ9CYC3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tmem39aQ9CYC3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Tmem39aQ9CYC3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem39aQ9CYC3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem39aQ9CYC3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem39aQ9CYC3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Tmem39aQ9CYC3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Gm2274-201ENSMUST00000184539 609 ntBASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.55■□□□□ 0.72
Tmem39aQ9CYC3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Tgds-204ENSMUST00000228543 1594 ntBASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.54■□□□□ 0.72
Tmem39aQ9CYC3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms