Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Trim13Q9CYB0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Idnk-204ENSMUST00000226010 1898 ntBASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim13Q9CYB0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim13Q9CYB0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim13Q9CYB0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim13Q9CYB0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim13Q9CYB0 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.14■□□□□ 0.17
Trim13Q9CYB0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim13Q9CYB0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim13Q9CYB0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.14■□□□□ 0.17
Trim13Q9CYB0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim13Q9CYB0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.14■□□□□ 0.17
Trim13Q9CYB0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms