Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf135Q9CWS1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf135Q9CWS1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf135Q9CWS1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 Gm29791-202ENSMUST00000207888 369 ntBASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.17■□□□□ 0.5
Rnf135Q9CWS1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rnf135Q9CWS1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf135Q9CWS1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Rnf135Q9CWS1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Rnf135Q9CWS1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf135Q9CWS1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms