Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm8495-201ENSMUST00000188740 694 ntBASIC20.57■□□□□ 0.88
Smc3Q9CW03 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc3Q9CW03 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc3Q9CW03 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc3Q9CW03 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.55■□□□□ 0.88
Smc3Q9CW03 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc3Q9CW03 Gm10418-201ENSMUST00000100943 576 ntBASIC20.55■□□□□ 0.88
Smc3Q9CW03 Mir5133-201ENSMUST00000174955 77 ntBASIC20.55■□□□□ 0.88
Smc3Q9CW03 Mir8112-201ENSMUST00000184382 131 ntBASIC20.55■□□□□ 0.88
Smc3Q9CW03 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc3Q9CW03 Rab3c-203ENSMUST00000224180 967 ntBASIC20.55■□□□□ 0.88
Smc3Q9CW03 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Smc3Q9CW03 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Smc3Q9CW03 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc3Q9CW03 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smc3Q9CW03 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.55■□□□□ 0.88
Smc3Q9CW03 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc3Q9CW03 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.54■□□□□ 0.88
Smc3Q9CW03 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc3Q9CW03 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Smc3Q9CW03 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc3Q9CW03 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc3Q9CW03 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smc3Q9CW03 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smc3Q9CW03 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc3Q9CW03 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Smc3Q9CW03 Gm27405-201ENSMUST00000184201 112 ntBASIC20.52■□□□□ 0.88
Smc3Q9CW03 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smc3Q9CW03 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc3Q9CW03 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.52■□□□□ 0.88
Smc3Q9CW03 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc3Q9CW03 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc3Q9CW03 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Smc3Q9CW03 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Smc3Q9CW03 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Smc3Q9CW03 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc3Q9CW03 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.51■□□□□ 0.87
Smc3Q9CW03 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Gm11927-201ENSMUST00000118472 759 ntBASIC20.51■□□□□ 0.87
Smc3Q9CW03 Mir2861-201ENSMUST00000175539 82 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms