Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrrc40Q9CRC8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.38■□□□□ 0.37
Lrrc40Q9CRC8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrrc40Q9CRC8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lrrc40Q9CRC8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrrc40Q9CRC8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.38■□□□□ 0.37
Lrrc40Q9CRC8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Gm13158-201ENSMUST00000122007 736 ntBASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrrc40Q9CRC8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrrc40Q9CRC8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrc40Q9CRC8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Gm12441-201ENSMUST00000121806 588 ntBASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrc40Q9CRC8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrrc40Q9CRC8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrrc40Q9CRC8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrrc40Q9CRC8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrrc40Q9CRC8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Lrrc40Q9CRC8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lrrc40Q9CRC8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lrrc40Q9CRC8 Gm6576-201ENSMUST00000169678 883 ntBASIC17.33■□□□□ 0.36
Lrrc40Q9CRC8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lrrc40Q9CRC8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.33■□□□□ 0.36
Lrrc40Q9CRC8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lrrc40Q9CRC8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Gm20049-201ENSMUST00000219950 730 ntBASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms