Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retreg3Q9CQV4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retreg3Q9CQV4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Gm8969-201ENSMUST00000199694 526 ntBASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retreg3Q9CQV4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retreg3Q9CQV4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retreg3Q9CQV4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retreg3Q9CQV4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.52■□□□□ 0.39
Retreg3Q9CQV4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Gm4974-201ENSMUST00000209974 875 ntBASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retreg3Q9CQV4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Gm6754-201ENSMUST00000117124 913 ntBASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Gm37055-201ENSMUST00000191866 133 ntBASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retreg3Q9CQV4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms