Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Gm26524-201ENSMUST00000192339 390 ntBASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Rab3c-203ENSMUST00000224180 967 ntBASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rer1Q9CQU3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Gm29791-202ENSMUST00000207888 369 ntBASIC14.3□□□□□ -0.12
Rer1Q9CQU3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rer1Q9CQU3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rer1Q9CQU3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rer1Q9CQU3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms