Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Gm9959-201ENSMUST00000068277 390 ntBASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTRAFQ9CQE8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTRAFQ9CQE8 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Golgb1-201ENSMUST00000023534 498 ntBASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Haglr-201ENSMUST00000100000 2085 ntBASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RTRAFQ9CQE8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTRAFQ9CQE8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTRAFQ9CQE8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms