Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim11Q99PQ2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim11Q99PQ2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim11Q99PQ2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim11Q99PQ2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Gm13158-201ENSMUST00000122007 736 ntBASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim11Q99PQ2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim11Q99PQ2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Gm12441-201ENSMUST00000121806 588 ntBASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms