Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim33Q99PP7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim33Q99PP7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim33Q99PP7 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.3■□□□□ 0.36
Trim33Q99PP7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim33Q99PP7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trim33Q99PP7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim33Q99PP7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim33Q99PP7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.3■□□□□ 0.36
Trim33Q99PP7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim33Q99PP7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim33Q99PP7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.29■□□□□ 0.36
Trim33Q99PP7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim33Q99PP7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim33Q99PP7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.28■□□□□ 0.36
Trim33Q99PP7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.28■□□□□ 0.36
Trim33Q99PP7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.28■□□□□ 0.36
Trim33Q99PP7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim33Q99PP7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Gm10698-201ENSMUST00000182663 604 ntBASIC17.27■□□□□ 0.36
Trim33Q99PP7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim33Q99PP7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim33Q99PP7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim33Q99PP7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.27■□□□□ 0.35
Trim33Q99PP7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim33Q99PP7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.27■□□□□ 0.35
Trim33Q99PP7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim33Q99PP7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim33Q99PP7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trim33Q99PP7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim33Q99PP7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim33Q99PP7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Gm18025-201ENSMUST00000221733 862 ntBASIC17.26■□□□□ 0.35
Trim33Q99PP7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim33Q99PP7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.25■□□□□ 0.35
Trim33Q99PP7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms