Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raf1Q99N57 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Raf1Q99N57 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.69■□□□□ 0.1
Raf1Q99N57 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.69■□□□□ 0.1
Raf1Q99N57 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raf1Q99N57 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Raf1Q99N57 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raf1Q99N57 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Raf1Q99N57 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raf1Q99N57 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Raf1Q99N57 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raf1Q99N57 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raf1Q99N57 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.68■□□□□ 0.1
Raf1Q99N57 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Raf1Q99N57 Gm10812-201ENSMUST00000099864 546 ntBASIC15.68■□□□□ 0.1
Raf1Q99N57 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Raf1Q99N57 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raf1Q99N57 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.68■□□□□ 0.1
Raf1Q99N57 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Raf1Q99N57 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raf1Q99N57 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Raf1Q99N57 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raf1Q99N57 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raf1Q99N57 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.68■□□□□ 0.1
Raf1Q99N57 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raf1Q99N57 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Raf1Q99N57 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Raf1Q99N57 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.67■□□□□ 0.1
Raf1Q99N57 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Raf1Q99N57 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Raf1Q99N57 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Raf1Q99N57 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Raf1Q99N57 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Raf1Q99N57 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raf1Q99N57 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Raf1Q99N57 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Raf1Q99N57 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Raf1Q99N57 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.66■□□□□ 0.1
Raf1Q99N57 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Raf1Q99N57 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Raf1Q99N57 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.65■□□□□ 0.1
Raf1Q99N57 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raf1Q99N57 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raf1Q99N57 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Raf1Q99N57 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.65■□□□□ 0.1
Raf1Q99N57 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Raf1Q99N57 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.65■□□□□ 0.1
Raf1Q99N57 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Raf1Q99N57 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Raf1Q99N57 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raf1Q99N57 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raf1Q99N57 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raf1Q99N57 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Raf1Q99N57 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raf1Q99N57 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Raf1Q99N57 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raf1Q99N57 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raf1Q99N57 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.65■□□□□ 0.1
Raf1Q99N57 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Raf1Q99N57 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Gm6420-201ENSMUST00000193885 723 ntBASIC15.64■□□□□ 0.09
Raf1Q99N57 Gm20049-201ENSMUST00000219950 730 ntBASIC15.64■□□□□ 0.09
Raf1Q99N57 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Raf1Q99N57 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms