Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Col25a1Q99MQ5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col25a1Q99MQ5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col25a1Q99MQ5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col25a1Q99MQ5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col25a1Q99MQ5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col25a1Q99MQ5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Col25a1Q99MQ5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col25a1Q99MQ5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col25a1Q99MQ5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col25a1Q99MQ5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col25a1Q99MQ5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col25a1Q99MQ5 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.08■□□□□ 0.48
Col25a1Q99MQ5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col25a1Q99MQ5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col25a1Q99MQ5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col25a1Q99MQ5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col25a1Q99MQ5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Col25a1Q99MQ5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col25a1Q99MQ5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Gm11779-201ENSMUST00000118541 368 ntBASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col25a1Q99MQ5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Col25a1Q99MQ5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col25a1Q99MQ5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col25a1Q99MQ5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Col25a1Q99MQ5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.03■□□□□ 0.48
Col25a1Q99MQ5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.03■□□□□ 0.48
Col25a1Q99MQ5 Gm45328-201ENSMUST00000210942 917 ntBASIC18.03■□□□□ 0.48
Col25a1Q99MQ5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Col25a1Q99MQ5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms