Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Gm7461-201ENSMUST00000058918 827 ntBASIC15.3■□□□□ 0.04
Scrt1Q99M85 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scrt1Q99M85 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.29■□□□□ 0.04
Scrt1Q99M85 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Gm7284-201ENSMUST00000131667 944 ntBASIC15.29■□□□□ 0.04
Scrt1Q99M85 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.29■□□□□ 0.04
Scrt1Q99M85 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.29■□□□□ 0.04
Scrt1Q99M85 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scrt1Q99M85 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.28■□□□□ 0.04
Scrt1Q99M85 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scrt1Q99M85 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scrt1Q99M85 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scrt1Q99M85 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scrt1Q99M85 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scrt1Q99M85 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scrt1Q99M85 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.28■□□□□ 0.04
Scrt1Q99M85 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scrt1Q99M85 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scrt1Q99M85 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scrt1Q99M85 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Scrt1Q99M85 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Mir6349-201ENSMUST00000184059 97 ntBASIC15.27■□□□□ 0.04
Scrt1Q99M85 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scrt1Q99M85 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.27■□□□□ 0.03
Scrt1Q99M85 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scrt1Q99M85 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Scrt1Q99M85 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms