Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 Gm26524-201ENSMUST00000192339 390 ntBASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cdk5rap3Q99LM2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Gm13148-201ENSMUST00000118892 745 ntBASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap3Q99LM2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap3Q99LM2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap3Q99LM2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Mir2861-201ENSMUST00000175539 82 ntBASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap3Q99LM2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cdk5rap3Q99LM2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.08■□□□□ 0.48
Cdk5rap3Q99LM2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms