Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Gm13836-201ENSMUST00000121159 501 ntBASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd3Q99LE3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Gm24841-201ENSMUST00000158676 357 ntBASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Gm9987-201ENSMUST00000069768 567 ntBASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd3Q99LE3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Gm6433-201ENSMUST00000118634 875 ntBASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Gm13559-201ENSMUST00000120476 863 ntBASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd3Q99LE3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd3Q99LE3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms