Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Gm24589-201ENSMUST00000116692 94 ntBASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Gm11355-201ENSMUST00000121120 306 ntBASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Gm43514-201ENSMUST00000198852 424 ntBASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cstf1Q99LC2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cstf1Q99LC2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cstf1Q99LC2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cstf1Q99LC2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Gm6443-201ENSMUST00000203599 874 ntBASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Cstf1Q99LC2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Gm11950-201ENSMUST00000121615 838 ntBASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cstf1Q99LC2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Gm24841-201ENSMUST00000158676 357 ntBASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms