Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb20Q91XZ9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb20Q91XZ9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb20Q91XZ9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Gm22885-201ENSMUST00000157410 107 ntBASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb20Q91XZ9 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Mir7071-201ENSMUST00000184847 69 ntBASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Gm3375-201ENSMUST00000203929 796 ntBASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Idnk-204ENSMUST00000226010 1898 ntBASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb20Q91XZ9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Gm15565-201ENSMUST00000118890 427 ntBASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms