Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga6Q91XY2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga6Q91XY2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga6Q91XY2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga6Q91XY2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhga6Q91XY2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga6Q91XY2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga6Q91XY2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms