Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb1Q91XX8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.14■□□□□ 0.5
Pcdhgb1Q91XX8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgb1Q91XX8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgb1Q91XX8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgb1Q91XX8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgb1Q91XX8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgb1Q91XX8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb1Q91XX8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Gm38027-201ENSMUST00000192315 235 ntBASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Gm29791-202ENSMUST00000207888 369 ntBASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb1Q91XX8 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdhgb1Q91XX8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhgb1Q91XX8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms